L. Swint-Kruse, K.S. Matthews, in Encyclopedia of organic Chemistry (Second Edition), 2013

Multiple Sites/Multiple Targets – DNA Looping




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In enhancement to the primary operator, LacO, shown in Figure 1, two ‘pseudo-operator’ assignment are present within the lac operon sequence and contribute to repression. The DNA order of the pseudo-operators are very similar, however not identical, to LacO and also are bound by LacI an ext weakly. The visibility of 2 DNA-binding website in LacI protein tetramer said a mechanism through which pseudo-operators could enhance repression – one LacI tetramer could bind two different operators and generate a looped DNA structure. Experimental proof for DNA looping has been obtained from a selection of laboratories. Recent evidence indicates that the angle between the two dimers have to open because that loop development to occur, as illustrated in Figure 4. These looped structures are very stabilized, accounting for the significant repression the lacZYA expression observed in bacterial cells. Indeed, DNA containing lot of operator sequences and with the supercoiling thickness characteristic of E. Coli exhibits a half-life for the facility that over 2 days. However, even these looped complexes respond rapidly (in less than 30 s) to the presence of inducer sugars, enabling quick adaptation come an exterior lactose resource that may be transient.


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Figure 4. Looped DNA structure. The teal blue curved line depicts the lac operon DNA (with shading to suggest nearness come observer), which contains three feasible LacI-binding web page (two that which, O1 and also O2, are presented bound come LacI). The pseudo-operator succession O2 is located within the lacZ gene, and also the primary operator sequence O1 overlaps the promoter sequence for the lacZYA metabolic gene (Figure 1). Tetrameric LacI is shown at the bottom of the number as simultaneously interacting with O1 and also O2. This structure loops the DNA and also generates a complex with very high stability.

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Note that the dimers in ~ a LacI tetramer different and embrace a bigger angle in between them once looping in between O1 and O2 than in the absence of looping (i.e., the structure presented in Figure 3(a)). The require for flexibility in between the dimers because that looping to occur is supported by speculative evidence.